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Scanning Tunneling Microscopy and Spectroscopy

Scanning tunneling microscopy (STM) holds a conducting tip a few ångströms from a conducting surface and regulates the vacuum tunneling current while the tip scans. Scanning tunneling spectroscopy (STS) records the current or differential conductance as the bias is varied at a point, along a line, or across a grid. The same junction can therefore resolve atomic-scale spatial structure and millielectronvolt-scale spectral structure.

Neither output is a direct photograph of atoms or of the local density of states. The recorded current depends exponentially on tip–sample separation and also on the electronic states, tip apex, tunneling matrix element, occupation factors, feedback history, voltage modulation, and instrumental response. Atomic resolution means that the junction is sensitive to atomic-scale electronic structure; it does not make every bright maximum an atomic coordinate.

A useful evidence ladder is:

  1. controller record: current, applied sample bias, commanded piezo coordinates, feedback error, and time;
  2. calibrated image or spectrum: height or conductance after scanner, voltage, current, phase, drift, and noise calibration;
  3. junction-level inference: apparent topography, a tunneling-weighted local spectrum, or a Fourier-space modulation;
  4. electronic inference: local states, a gap scale, a scattering process, or a defect resonance under a declared forward model;
  5. phase or mechanism claim: order, topology, pairing structure, or engineered quantum behavior supported by symmetry tests and independent probes.

STM/STS is unusually local and unusually sensitive. Those strengths make the forward model more important, not less.

This page is the canonical home for STM and STS practice in quantum matter: vacuum-junction current, current–distance sensitivity, the Tersoff–Hamann limit, bias and current conventions, feedback modes, topography versus spectroscopy, setpoint effects, energy resolution, conductance mapping, quasiparticle interference, superconducting gap imaging, atomic manipulation, defect spectroscopy, uncertainty, and reproducible reporting.

Tunneling Applications: First Encounters owns the elementary barrier-transmission picture. Green Functions in Many-Body QM and Spectral Functions own the general local spectral measure and probe convolution. BCS Theory owns the superconducting density of states and coherence factors. Edge and Surface States owns phase-level conclusions drawn from boundary spectra and scattering selection rules. This page connects those objects to an operating junction without repeating their full derivations.

The focus is elastic, equilibrium, single-tip STM/STS. Spin-polarized tips, superconducting tips, Josephson STM, inelastic electron tunneling, microwave and terahertz excitation, and pump–probe operation are introduced only where they alter the measurement model.

STM junction above the feedback-to-spectroscopy acquisition workflow

Top: a conducting tip and sample form a voltage-biased vacuum junction whose current is exponentially sensitive to the gap zz. Bottom: constant-current imaging keeps feedback on and records the required piezo height, whereas point or grid spectroscopy first establishes a setpoint, opens the feedback loop, sweeps VV, and records II and the lock-in estimate of dI/dVdI/dV.

The essential instrument contains:

  • a conducting sample and a sharpened conducting tip;
  • coarse approach and piezoelectric xx, yy, and zz positioning;
  • a low-noise bias source and current preamplifier;
  • a feedback controller that adjusts zz to maintain a current setpoint;
  • vibration isolation, thermal shielding, electrical filtering, and often ultrahigh vacuum;
  • optional cryogenic, magnetic-field, radio-frequency, and optical hardware.

The primary detector variable is current. A topograph is the zz command required by a feedback law, not a direct height measurement. A conductance spectrum may be obtained by numerical differentiation of I(V)I(V) or, more commonly, from the first-harmonic response to a small bias modulation. The raw data should retain at least

(xpiezo,ypiezo,zpiezo,V,I,Iset,Vset,t),\left( x_{\mathrm{piezo}}, y_{\mathrm{piezo}}, z_{\mathrm{piezo}}, V, I, I_{\mathrm{set}}, V_{\mathrm{set}}, t \right),

together with feedback gains, scan direction and speed, lock-in amplitude, frequency, phase and time constant, temperature, field, tip-treatment history, and sample preparation.

This page uses sample bias

V=Vsample−Vtip,V = V_{\mathrm{sample}} - V_{\mathrm{tip}},

with e>0e\gt0. For a normal-metal tip in the usual elastic-tunneling convention:

  • V>0V\gt0 predominantly probes empty sample states between the sample Fermi level and EF+eVE_F+eV;
  • V<0V\lt0 predominantly probes occupied sample states between EF+eVE_F+eV and the sample Fermi level.

Laboratories differ in whether positive current denotes conventional charge flow or electron flow. A publication must state both the bias definition and current sign. The words filled-state image and empty-state image are inadequate when tip states, semiconducting band bending, superconducting electrodes, or large biases matter.

Bardeen’s weak-coupling construction treats tip and sample as separately equilibrated electrodes and couples their states perturbatively. For tip state μ\mu and sample state ν\nu, the matrix element can be evaluated on a surface SS inside the barrier:

Mμν=−ℏ22m∫SdS⋅(ψμ∗∇ψν−ψν∇ψμ∗).M_{\mu\nu} = -\frac{\hbar^2}{2m} \int_S d\mathbf S\cdot \left( \psi_\mu^*\nabla\psi_\nu - \psi_\nu\nabla\psi_\mu^* \right).

If energy EE is measured from the sample chemical potential, a useful continuum form of the elastic current is

I(r0,V)∝∫−∞∞dE ×ρt(E−eV)×ρs(M)(r0,E;V)×[f(E−eV)−f(E)].\begin{aligned} I(\mathbf r_0,V) &\propto \int_{-\infty}^{\infty} dE\, \\ &\quad\times \rho_t(E-eV) \\ &\quad\times \rho_s^{(M)} \left( \mathbf r_0,E;V \right) \\ &\quad\times \left[ f(E-eV)-f(E) \right]. \end{aligned}

Here ρt\rho_t is the tip density of states and ρs(M)\rho_s^{(M)} is a matrix-element-weighted sample spectrum. The notation deliberately avoids identifying it with the bare sample density of states. Tip orbital symmetry, lateral momentum filtering, barrier shape, surface termination, and the voltage-dependent junction geometry all enter MμνM_{\mu\nu}.

The perturbative expression assumes a weak junction. At contact, at very high current, or under strong nonequilibrium drive, multiple scattering, force, heating, and atomic rearrangement invalidate the simple transfer picture.

For a locally rectangular barrier of effective height Φˉ\bar\Phi and low bias, a wavefunction decays with

κ≃2mΦˉℏ,I(z)∝e−2κz.\kappa \simeq \frac{\sqrt{2m\bar\Phi}}{\hbar}, \qquad I(z) \propto e^{-2\kappa z}.

In practical units,

κ≃0.512 ΦˉeV A˚−1,2κ≃1.025 ΦˉeV A˚−1.\begin{aligned} \kappa &\simeq 0.512\, \sqrt{\frac{\bar\Phi}{\mathrm{eV}}} \ \mathrm{\mathring A}^{-1}, \\ 2\kappa &\simeq 1.025\, \sqrt{\frac{\bar\Phi}{\mathrm{eV}}} \ \mathrm{\mathring A}^{-1}. \end{aligned}

For Φˉ=4 eV\bar\Phi=4\,\mathrm{eV}, retracting the tip by 1 A˚1\,\mathrm{\mathring A} reduces the idealized current by about a factor of eight. This exponential selectivity explains high vertical sensitivity and why vibration, drift, and a second microscopic protrusion on the tip are consequential.

An I(z)I(z) curve can define an apparent barrier height:

Φapp=ℏ28m(∂ln⁡I∂z)2.\Phi_{\mathrm{app}} = \frac{\hbar^2}{8m} \left( \frac{\partial\ln I}{\partial z} \right)^2.

Φapp\Phi_{\mathrm{app}} is a junction diagnostic, not automatically the arithmetic mean of independently measured work functions. Image potentials, bias, orbital character, piezo calibration, and mechanical relaxation can change the slope.

Local Spectral Density and the Tersoff–Hamann Limit

Section titled “Local Spectral Density and the Tersoff–Hamann Limit”

The local single-particle spectral density is related to the retarded Green function by

ρs(r,E)=−1πIm⁡GsR(r,r;E).\rho_s(\mathbf r,E) = -\frac{1}{\pi} \operatorname{Im} G_s^{\mathrm R}(\mathbf r,\mathbf r;E).

For independent particles this reduces to

ρs(r,E)=∑n∣ψn(r)∣2δ(E−En).\rho_s(\mathbf r,E) = \sum_n \left| \psi_n(\mathbf r) \right|^2 \delta(E-E_n).

It is local in real space but summed over whatever momentum, band, spin, and orbital components can tunnel into the tip.

Tersoff and Hamann modeled an ss-wave tip apex and a weak, low-bias vacuum junction. At low temperature, with a featureless tip spectrum and slowly varying matrix element,

I(r0,V)∝∫0eVdϵ ρs(r0,EF+ϵ),I(\mathbf r_0,V) \propto \int_0^{eV} d\epsilon\, \rho_s \left( \mathbf r_0, E_F+\epsilon \right),

and therefore

dIdV(r0,V)∝ρs(r0,EF+eV).\frac{dI}{dV}(\mathbf r_0,V) \propto \rho_s \left( \mathbf r_0, E_F+eV \right).

This is the central STS approximation. It is powerful precisely because its assumptions are testable. The proportionality can fail or become strongly weighted when:

  • the tip density of states varies over the bias window;
  • the apex has important pp- or dd-orbital character;
  • several sample orbitals have different vacuum decay constants;
  • the barrier transmission changes rapidly with bias;
  • the sample is semiconducting and the tip electric field bends bands;
  • the voltage drops outside the intended vacuum barrier;
  • the junction becomes inelastic, nonequilibrium, or strongly coupled.

Chen’s derivative rule makes the orbital warning concrete: a nonspherical apex can couple to spatial derivatives of the sample wavefunction rather than simply to its value at r0\mathbf r_0. Changing the tip can then reverse contrast or suppress a state without changing the sample.

With a normal, featureless tip and bias-independent matrix element, finite temperature gives approximately

dIdV(V)∝∫−∞∞dE ρs(E)×[−∂f(E−eV)∂E].\begin{aligned} \frac{dI}{dV}(V) &\propto \int_{-\infty}^{\infty} dE\, \rho_s(E) \\ &\quad\times \left[ -\frac{\partial f(E-eV)}{\partial E} \right]. \end{aligned}

The full width at half maximum of −∂f/∂E-\partial f/\partial E is about 3.53kBT3.53k_{\mathrm B}T. At 4.2 K4.2\,\mathrm K, this thermal width is approximately 1.28 meV1.28\,\mathrm{meV} before electrical noise or lock-in broadening is included.

A lock-in amplifier does not calculate an infinitesimal derivative. It measures a finite-amplitude first harmonic, so the reported conductance is the intrinsic junction response convolved with a kernel fixed by the modulation waveform, amplitude, filter, and phase. Quoting only the base temperature while omitting the bias-modulation amplitude does not specify the energy resolution. The most defensible analysis forward-convolves a spectral model with the thermal, modulation, and electrical response rather than removing broadening by an unstable deconvolution.

Let h(r)h(\mathbf r) be the geometric surface height and zp(r)z_{\mathrm p}(\mathbf r) the laboratory piezo coordinate. In a simple low-bias model,

Iset≃C exp⁡[−2κ(zp−h)]W(r,Vset),W(r,Vset)=∫0eVsetdϵ ρs(r,EF+ϵ).\begin{aligned} I_{\mathrm{set}} \simeq C\, \exp \left[ -2\kappa \left( z_{\mathrm p}-h \right) \right] W(\mathbf r,V_{\mathrm{set}}), \\ W(\mathbf r,V_{\mathrm{set}}) = \int_0^{eV_{\mathrm{set}}} d\epsilon\, \rho_s \left( \mathbf r, E_F+\epsilon \right). \end{aligned}

Solving for the recorded piezo coordinate gives

zp(r)=h(r)+12κln⁡[C W(r,Vset)Iset].z_{\mathrm p}(\mathbf r) = h(\mathbf r) + \frac{1}{2\kappa} \ln \left[ \frac{C\,W(\mathbf r,V_{\mathrm{set}})} {I_{\mathrm{set}}} \right].

A constant-current topograph therefore combines geometric height, integrated electronic weight, barrier transmission, and tip response. Bias-dependent contrast reversal is often useful evidence of electronic structure, but it is also proof that apparent height is not purely geometric.

The feedback bandwidth must be fast enough to track the intended corrugation and slow enough not to chase current noise. Excessive gain produces ringing; insufficient gain produces tracking error. Trace and retrace disagreement can expose drift, creep, tip changes, or an unstable loop.

With feedback disabled, the tip follows a prescribed plane and the current is recorded. Constant-height mode avoids feedback convolution and can be faster, but it is less tolerant of tilt, steps, debris, drift, and piezo nonlinearity. A collision can alter both tip and sample. Constant-height data are meaningful only when the scan plane and safety margin are documented.

A common spectroscopy cycle is:

  1. stabilize the feedback at (Vset,Iset)(V_{\mathrm{set}},I_{\mathrm{set}});
  2. wait for the junction and filters to settle;
  3. open the feedback loop;
  4. sweep VV while recording I(V)I(V) and optionally lock-in dI/dVdI/dV;
  5. return to the setpoint, close feedback, and move to the next position.

The stabilization step imprints a setpoint effect. In the simple model, the fixed junction height obeys

e−2κz(r)∝IsetW(r,Vset).e^{-2\kappa z(\mathbf r)} \propto \frac{I_{\mathrm{set}}} {W(\mathbf r,V_{\mathrm{set}})}.

Consequently, a conductance map scales approximately as

dIdV(r,V)∝Iset ρs(r,EF+eV)∫0eVsetdϵ ρs(r,EF+ϵ).\frac{dI}{dV}(\mathbf r,V) \propto \frac{ I_{\mathrm{set}}\, \rho_s(\mathbf r,E_F+eV) }{ \displaystyle \int_0^{eV_{\mathrm{set}}} d\epsilon\, \rho_s(\mathbf r,E_F+\epsilon) }.

Spatial variation in the integrated denominator can create, suppress, or mix Fourier components. Comparing maps acquired with different setpoints, analyzing the simultaneously acquired current, and forward-modeling the normalization are stronger than assuming the denominator is uniform.

The normalized conductance

dI/dVI/V\frac{dI/dV}{I/V}

can reduce a slowly varying transmission factor and extend dynamic range, especially in semiconductor spectroscopy. It is not model free: the ratio is unstable near zero current or zero bias, requires a declared regularization or smoothing procedure, and can shift or reshape features.

An elastic defect can scatter a quasiparticle from k\mathbf k to k+q\mathbf k+\mathbf q. Interference between incident and scattered amplitudes modulates the local spectral density. A conductance map

g(r,E)≡dIdV(r,V)∣eV=Eg(\mathbf r,E) \equiv \left. \frac{dI}{dV}(\mathbf r,V) \right|_{eV=E}

can be drift-corrected, windowed, Fourier transformed, and compared across energy to obtain dispersing features in g(q,E)g(\mathbf q,E).

A joint-density-of-states construction,

J(q,E)=∫ddk(2π)d A(k,E)A(k+q,E),J(\mathbf q,E) = \int \frac{d^d k}{(2\pi)^d}\, A(\mathbf k,E) A(\mathbf k+\mathbf q,E),

identifies pairs of high-spectral-weight states separated by q\mathbf q. It is a phase-space guide, not a complete QPI theory. In a single-impurity TT-matrix treatment,

δρ(q,E)=−1πIm⁡∫ddk(2π)d×Tr⁡[G0(k,E)×Tk,k+q(E)×G0(k+q,E)].\begin{aligned} \delta\rho(\mathbf q,E) &= -\frac{1}{\pi} \operatorname{Im} \int \frac{d^d k}{(2\pi)^d} \\ &\quad\times \operatorname{Tr} \big[ G_0(\mathbf k,E) \\ &\qquad\quad\times T_{\mathbf k,\mathbf k+\mathbf q}(E) \\ &\qquad\quad\times G_0(\mathbf k+\mathbf q,E) \big]. \end{aligned}

The Green functions carry band, orbital, spin, particle–hole, and coherence-factor structure; the impurity TT matrix carries the defect potential and scattering channel. Two geometrically allowed vectors can therefore have very different intensities.

A reliable QPI workflow:

  1. correct drift using the atomic lattice and preserve the transformation metadata;
  2. inspect the real-space map, defects, step edges, scan-line artifacts, and tip stability;
  3. compare raw, symmetrized, and differently windowed Fourier transforms;
  4. separate Bragg peaks, structural superlattices, nondispersive order, and dispersive scattering;
  5. fit the complete energy-dependent pattern with candidate bands and scattering matrices;
  6. compare with ARPES or another momentum-resolved probe when possible.

For an isotropic contour, backscattering gives q≃2kq\simeq2k, but that mnemonic is not universal. Multiband, anisotropic, spin-textured, and superconducting systems require vector assignments and coherence factors. Absence of a nominal 2k2k peak is not by itself proof of topological protection: tip and orbital matrix elements, the impurity population, finite field of view, overlapping features, and signal-to-noise can all hide it. The Edge and Surface States page owns the corresponding topology claim.

Setpoint normalization is especially important in Fourier analysis because the denominator can mix spatial structure from the entire stabilization window into every energy slice. A Fourier peak is an observed modulation; calling it QPI requires dispersion and a scattering model.

With a normal tip and a simple isotropic superconductor, low-temperature conductance can show suppressed subgap weight and coherence peaks near ∣eV∣=Δ\lvert eV\rvert=\Delta. Real spectra can instead reflect an anisotropic or nodal gap, several bands, pair breaking, lifetime effects, spatial inhomogeneity, surface states, competing order, and instrumental convolution. BCS Theory gives the ideal density of states and the commonly used Dynes broadening; this page focuses on what a map establishes.

A defensible gap map fits each spectrum to a common forward model:

gmeas(r,V)=(RE∗gjunction)(r,V).\begin{aligned} g_{\mathrm{meas}}(\mathbf r,V) &= \left( \mathcal R_E * g_{\mathrm{junction}} \right) \left( \mathbf r,V \right). \end{aligned}

Here gjunctiong_{\mathrm{junction}} carries parameters such as Δ\Delta and Γ\Gamma, while RE\mathcal R_E includes thermal, modulation, and electrical resolution. Fit parameters, bounds, background, rejected pixels, covariance, and residuals should accompany the map. Half the coherence-peak separation is a descriptive energy scale, not a universal estimator of the order parameter.

With a superconducting tip, the conductance contains both electrode spectra. For two fully gapped electrodes, prominent quasiparticle thresholds occur near

∣eV∣≃Δt+Δs,\lvert eV\rvert \simeq \Delta_t+\Delta_s,

not at the sample gap alone. A calibrated superconducting tip can sharpen effective resolution and provide particle–hole mixing information, but tip-gap inhomogeneity and Josephson or nonequilibrium contributions must be modeled.

Useful superconducting imaging modes include:

  • maps of fitted gap scale, broadening, zero-bias conductance, and coherence-peak weight;
  • field-dependent vortex imaging and vortex-core spectroscopy;
  • impurity-bound-state maps and their particle–hole structure;
  • energy-resolved QPI with superconducting coherence factors;
  • Josephson STM, where pair tunneling probes local phase-coherent response.

A local single-particle gap is not automatically a superconducting order parameter. Temperature and field evolution, phase-sensitive information, vortex response, and bulk thermodynamic or electrodynamic evidence strengthen the assignment. Spatial anticorrelation between two fitted quantities does not establish that one causes the other; setpoint, fit covariance, and shared normalization must be tested.

The tip is an actuator as well as a detector. By reducing the separation, changing the bias, or applying a controlled pulse, an experiment can:

  • drag, push, or pull an adsorbate laterally;
  • transfer an atom or molecule between tip and sample;
  • change a molecular conformation, charge state, or spin state;
  • desorb material, create a vacancy, or move a domain wall;
  • assemble artificial lattices, corrals, and coupled impurity structures.

Eigler and Schweizer’s low-temperature positioning of individual xenon atoms demonstrated deterministic lateral manipulation. Crommie, Lutz, and Eigler then assembled iron-atom corrals and observed confined surface-state resonances. These experiments establish a workflow, not a universal mechanism: manipulation can be driven by tip–adsorbate forces, electric fields, current-induced excitation, local heating, or chemical transfer, depending on junction parameters.

Before and after images should be acquired with nondestructive settings, and a manipulation threshold should be mapped against current, bias, pulse duration, and approach distance. The current transient and final tip state are part of the evidence. An apparent disappearance may mean transfer to the tip, diffusion outside the field of view, a changed charge state, or changed contrast.

Defects can be studied rather than moved. A point defect may produce a local resonance, Friedel oscillations, a magnetic or superconducting bound state, or a charging feature. Assignment requires comparison among defect species, spatial decay and symmetry, field and temperature response, and a microscopic impurity model. The topographic shape alone rarely identifies the chemical species.

Inelastic STS detects thresholds where tunneling electrons excite a vibration, spin transition, or other local mode. The signal may appear in d2I/dV2d^2I/dV^2 or as steps in dI/dVdI/dV. Heating, vibrational pumping, and competing elastic structure must be excluded. This is a different operator channel from the elastic local spectral density.

The same local electric field and force that enable manipulation can perturb passive spectroscopy:

  • semiconductors and low-density systems can exhibit tip-induced band bending;
  • small islands and molecules can charge, gate, or undergo Coulomb blockade;
  • a magnetic or superconducting tip can exchange-couple or proximity-couple to the sample;
  • high current can heat, switch, or damage the surface;
  • the apex can pick up atoms and change orbital or spin sensitivity.

Varying tip height and setpoint is therefore a physical control experiment. A feature that shifts with junction resistance may belong to the junction rather than to the unperturbed sample.

  1. Prepare or cleave the surface under controlled conditions and record elapsed time, pressure, and thermal history.
  2. Condition the tip on a reference region; verify a single apex using atomic lattice images, step edges, and reproducible spectra.
  3. Calibrate lateral scale and shear against known lattice vectors, including scanner rotation.
  4. Calibrate zz sensitivity and current preamplifier gain; acquire I(z)I(z) curves over a safe range.
  5. Verify bias polarity, voltage offset, current sign, lock-in phase, and the energy reference using a known metallic or superconducting spectrum.
  6. Measure vibration and electrical noise with the feedback loop both closed and open.
  • save forward and reverse scans and the feedback error channel;
  • repeat representative spectra before, during, and after a grid;
  • retain topography, current, and conductance acquired under the same setpoint;
  • record every change in tip conditioning, scan angle, speed, gain, filter, and setpoint;
  • randomize or repeat temperature and field sweeps when drift or aging can mimic a trend;
  • avoid processing that overwrites raw coordinates or removes scan-line structure irreversibly.

Scanner creep, thermal drift, hysteresis, and nonlinear piezo response can deform a lattice over a long map. Drift correction should use declared fiducials and preserve an uncorrected copy. Plane subtraction, line flattening, Fourier filtering, symmetrization, and registration can all alter long-wavelength or symmetry information. Show enough intermediate data that a reader can distinguish a sample feature from an analysis choice.

SymptomPlausible causeDiagnostic
duplicated atoms or parallel featuresdouble or multiple tip apeximage an isolated defect or step; recondition tip
streaks and abrupt contrast changestip rearrangement, feedback transient, vibrationcompare trace/retrace, error channel, and time order
scan-direction-dependent latticecreep, hysteresis, cross-couplingrotate scan, reverse direction, calibrate both axes
broad or shifted spectral featuretemperature, modulation, voltage offset, tip spectrumreference spectrum and full resolution convolution
spatial contrast changes with setpointintegrated-density normalization or barrier weightingrepeat several (Vset,Iset)(V_{\mathrm{set}},I_{\mathrm{set}}) pairs
strong low-frequency stripesline noise, drift, feedback gain, flatteninginspect raw lines, noise spectrum, and scan-speed scaling
feature moves with junction resistanceband bending, charging, heating, forcevary tip height at fixed location and model electrostatics
Fourier peak appears after symmetrizationprocessing or finite-window artifactshow unsymmetrized maps and alternate windows
gap map follows topographysetpoint, tip change, or fit covariancecompare raw spectra, residuals, and independent setpoints
atom changes identity after a pulsetip pickup or charge-state contrastreimage reference surface and characterize the apex

An uncertainty budget should separate at least:

  • coordinate uncertainty: scanner calibration, drift, creep, and registration;
  • energy uncertainty: voltage calibration, offset, thermal width, modulation kernel, and noise;
  • amplitude uncertainty: preamplifier gain, lock-in phase, feedback state, and normalization;
  • junction uncertainty: tip spectrum and orbital character, barrier, setpoint, and voltage division;
  • sample uncertainty: surface termination, contamination, domains, aging, and preparation history;
  • model uncertainty: background, fit family, impurity potential, band assignment, and parameter covariance.

Repeated pixels in one map are not independent preparations. Reproducibility across tips, cleaves, samples, and acquisition sequences is stronger evidence than a small fit error on one large grid.

  • Calling a topograph atomic positions. It is a constant-current isosurface shaped by geometry and integrated electronic weight.
  • Writing dI/dV=ρsdI/dV=\rho_s without assumptions. Temperature, tip states, matrix elements, barrier transmission, and setpoint enter.
  • Inferring bias polarity from a software label. State the electrical convention and verify it experimentally.
  • Treating lock-in output as an exact derivative. Finite modulation is a convolution and contributes to energy resolution.
  • Comparing maps with different setpoints as though only energy changed. Junction height and normalization changed too.
  • Assigning every Fourier peak to QPI. Bragg peaks, order, drift, windows, and scan-line artifacts can be nondispersive.
  • Reading a superconducting order parameter directly from peak spacing. Electrode convolution, anisotropy, broadening, and competing gaps intervene.
  • Assuming an atomically sharp tip has a known orbital. The apex is part of the measurement operator and can change mid-scan.
  • Using symmetry averaging as evidence of symmetry. Symmetrization imposes what it is supposed to test.
  • Equating local surface evidence with a bulk phase. Combine STM/STS with bulk-sensitive and phase-sensitive measurements.
  • Unconventional Superconductivity places local gap, node, and sign-sensitive clues into a crystal-symmetry evidence ledger; this page retains the tip, surface, tunneling-matrix, feedback, and convolution forward model.
  • How Quantum Matter Is Measured supplies the general record-to-claim and uncertainty framework.
  • Spectral Functions gives the canonical many-body meaning of local addition and removal weight.
  • Angle-Resolved Photoemission Spectroscopy provides complementary momentum-resolved, spatially averaged surface spectroscopy.
  • Charge and Spin Density Waves distinguishes static order from dispersive interference and sets the multi-probe standard for density-wave claims.
  • Weyl and Dirac Semimetals uses surface spectroscopy and QPI as part of a broader bulk–surface evidence package.
  • BCS Theory owns ideal superconducting spectra, coherence factors, and the distinction between fit broadening and microscopic lifetime.
  • Superconducting Proximity Effect predicts spatial minigaps, anomalous-amplitude profiles, and inverse suppression in inhomogeneous superconductors, while this page retains tip, setpoint, matrix-element, convolution, and surface-preparation effects.
  • Vortex Matter, Pinning, and Flux Flow uses calibrated vortex positions and their field, temperature, and history dependence to test collective order and pinning, while this page retains tunneling setpoints, spectral convolution, and local core imaging.
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Exercise 1: Current–distance sensitivity

Section titled “Exercise 1: Current–distance sensitivity”

Take an effective barrier height Φˉ=4.0 eV\bar\Phi=4.0\,\mathrm{eV}. Estimate κ\kappa and the current ratio I(z+1 A˚)/I(z)I(z+1\,\mathrm{\mathring A})/I(z) in the rectangular-barrier approximation.

Solution

The inverse decay length is

κ≃0.5124.0 A˚−1=1.024 A˚−1.\kappa \simeq 0.512\sqrt{4.0}\, \mathrm{\mathring A}^{-1} = 1.024\, \mathrm{\mathring A}^{-1}.

Therefore

I(z+1 A˚)I(z)=exp⁡(−2κ×1 A˚)=e−2.048≃0.129.\begin{aligned} \frac{I(z+1\,\mathrm{\mathring A})}{I(z)} &= \exp \left( -2\kappa\times1\,\mathrm{\mathring A} \right) \\ &= e^{-2.048} \simeq 0.129. \end{aligned}

A one-ångström retraction lowers the current by a factor of about 7.87.8. The exact factor is junction dependent because Φˉ\bar\Phi and the orbital matrix element are effective quantities.

Exercise 2: Electronic corrugation in a topograph

Section titled “Exercise 2: Electronic corrugation in a topograph”

At fixed geometric height, suppose the integrated spectral weight W(r,Vset)W(\mathbf r,V_{\mathrm{set}}) doubles between two sites while κ=1.0 A˚−1\kappa=1.0\,\mathrm{\mathring A}^{-1}. What apparent height difference is required to keep the current constant?

Solution

At constant current,

e−2κz2(2W)=e−2κz1W.e^{-2\kappa z_2}(2W) = e^{-2\kappa z_1}W.

Thus

Δz=z2−z1=ln⁡22κ≃0.347 A˚.\Delta z = z_2-z_1 = \frac{\ln2}{2\kappa} \simeq 0.347\,\mathrm{\mathring A}.

The feedback retracts the tip over the electronically brighter site. The recorded 0.347 A˚0.347\,\mathrm{\mathring A} corrugation is electronic even though the geometric surface is flat.

Estimate the full width at half maximum of the thermal kernel −∂f/∂E-\partial f/\partial E at T=4.2 KT=4.2\,\mathrm K. Use kB=0.08617 meV K−1k_{\mathrm B}=0.08617\,\mathrm{meV\,K^{-1}}.

Solution

The width is

ΔET≃3.53kBT=3.53(0.08617 meV K−1)×(4.2 K)≃1.28 meV.\begin{aligned} \Delta E_T &\simeq 3.53k_{\mathrm B}T \\ &= 3.53 \left( 0.08617\,\mathrm{meV\,K^{-1}} \right) \\ &\quad\times \left( 4.2\,\mathrm K \right) \\ &\simeq 1.28\,\mathrm{meV}. \end{aligned}

This is only the thermal contribution. Bias modulation, voltage noise, filtering, and the tip spectrum broaden the measured feature further.

Under this page’s convention, V=Vsample−VtipV=V_{\mathrm{sample}}-V_{\mathrm{tip}}. Which side of the sample spectrum is emphasized at V=+50 mVV=+50\,\mathrm{mV} with a normal featureless tip, and why?

Solution

Positive sample bias predominantly allows occupied tip states to tunnel into empty sample states. At low temperature, the main window extends from EFE_F to approximately EF+50 meVE_F+50\,\mathrm{meV}. The measurement therefore emphasizes the sample’s unoccupied side.

This answer depends on the declared voltage convention. A software channel called “bias” is not sufficient evidence of polarity.

An approximately circular constant-energy contour has radius k=0.15 A˚−1k=0.15\,\mathrm{\mathring A}^{-1}. If a visible modulation is assigned to backscattering, estimate its wavevector magnitude and real-space wavelength.

Solution

For ideal backscattering,

q≃2k=0.30 A˚−1.q \simeq 2k = 0.30\,\mathrm{\mathring A}^{-1}.

The corresponding real-space wavelength is

λ=2πq≃20.9 A˚.\lambda = \frac{2\pi}{q} \simeq 20.9\,\mathrm{\mathring A}.

The numerical conversion does not validate the assignment. Orbital and spin overlap, the impurity TT matrix, alternative interband vectors, setpoint mixing, and the observed energy dispersion must also agree.

A fully gapped sample has Δs=1.5 meV\Delta_s=1.5\,\mathrm{meV} and a calibrated superconducting tip has Δt=1.2 meV\Delta_t=1.2\,\mathrm{meV}. Where should the simplest quasiparticle thresholds occur at low temperature?

Solution

For two fully gapped electrodes, quasiparticle tunneling turns on strongly near the sum of the gaps:

∣eVth∣≃Δs+Δt=2.7 meV.\left| eV_{\mathrm{th}} \right| \simeq \Delta_s+\Delta_t = 2.7\,\mathrm{meV}.

The corresponding bias magnitudes are approximately 2.7 mV2.7\,\mathrm{mV}. Reading the observed threshold as Δs\Delta_s would overestimate the sample gap. A quantitative fit must still include temperature, broadening, both electrode spectra, and any Josephson contribution near zero bias.